aslprep.sdcflows.workflows.outputs module

Writing out outputs.

init_sdc_unwarp_report_wf(name='sdc_unwarp_report_wf', forcedsyn=False)[source]

Save a reportlet showing how SDC unwarping performed.

This workflow generates and saves a reportlet showing the effect of fieldmap unwarping a BOLD image.

Workflow Graph
../_images/aslprep-sdcflows-workflows-outputs-1.png

(Source code, png, svg, pdf)

Parameters:

  • name (str, optional) – Workflow name (default: sdc_unwarp_report_wf)

  • forcedsyn (bool, optional) – Whether SyN-SDC was forced.

Inputs:

  • in_pre – Reference image, before unwarping

  • in_post – Reference image, after unwarping

  • in_seg – Segmentation of preprocessed structural image, including gray-matter (GM), white-matter (WM) and cerebrospinal fluid (CSF)

  • in_xfm – Affine transform from T1 space to BOLD space (ITK format)