aslprep.utils.plotting module

Plotting functions and classes.

class CBFPlot(cbf, ref_vol, label, outfile, vmax)

Bases: object

Generate the CBF Summary Plot.

This plot restricts CBF values to -20 (if there are negative values) or 0 (if not) to 100.

cbf

label

outfile

plot()

Generate the plot.

This plot restricts CBF values to -20 (if there are negative values) or 0 (if not) to 100.

ref_vol

vmax

class fMRIPlot(timeseries, segments, confounds=None, conf_file=None, tr=None, usecols=None, units=None, vlines=None, spikes_files=None, nskip=0, sort_carpet=True, paired_carpet=False)

Bases: object

Generates the fMRI Summary Plot.

confounds

nskip

paired_carpet

plot(figure=None)

Generate fMRI plot.

segments

sort_carpet

spikes

timeseries

tr

plot_stat_map(cbf, ref_vol, plot_params=None, order=('z', 'x', 'y'), vmax=100, estimate_brightness=False, label=None, compress='auto')

Plot statistical map.