aslprep.utils.plotting module

Plotting functions and classes.

class CBFPlot(in_file, ref_vol, label, outfile, vmin, vmax)

Bases: object

Generate the CBF Summary Plot.

This plot restricts CBF values to -20 (if there are negative values) or 0 (if not) to 100.

in_file

label

outfile

plot()

Generate the plot.

This plot restricts CBF values to -20 (if there are negative values) or 0 (if not) to 100.

ref_vol

vmax

vmin

plot_stat_map(img, ref_vol, plot_params=None, order=('z', 'x', 'y'), vmin=None, vmax=100, estimate_brightness=False, label=None, compress='auto', cmap='coolwarm')

Plot statistical map.